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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46055624_46056837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46055624 - 46056837

Intron Length:

1214

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTTTACATAATT

Flanking Amino Acid:

TGYINASHIKISVGGMEWDY

Intron Amino Acid Position:

969

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

91.5

0.93

0.6

86.8

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

69.3

0.68

1.8

90.28

33.2

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951