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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46057060_46059420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46057060 - 46059420

Intron Length:

2361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTATGGTGA

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ATGTAGTTATCT

Flanking Amino Acid:

ESTRATNDERCKVLEQRLEQ

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

59.3

42.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.7

0.74

0.7

81.2

30.9

Minor 5ss

41.7

-0.9

3.1

46.6

48.7

Minor BPS

47.2

-0.1

2.4

71.2

45.5

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008985

46053290 - 46085240

31951

ENSAPLT00000046700

46053290 - 46088500

35211