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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46059559_46061879_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46059559 - 46061879

Intron Length:

2321

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGTGGA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

ATATTTGTAAGT

Flanking Amino Acid:

NIVEGLPPLGGMKKNKTDAK

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.3

40.8

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

-1.8

3.2

40.9

45.4

Minor BPS

48.1

-0

2.2

70.07

41.4

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951