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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46073766_46075809_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46073766 - 46075809

Intron Length:

2044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAACTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCATGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTTCATG

Flanking Amino Acid:

TVSQLQQEITRYQYYLQLKK

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

75.6

35.3

Major BPS

100

1.24

0.5

100

Major PPT

81.3

0.7

0.8

29.6

Minor 5ss

47.8

-0.2

2.9

67.4

Minor BPS

53.4

-0

1.8

61.64

41.7

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211

ENSAPLT00000008985

46053290 - 46085240

31951