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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46085241_46088452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

46085241 - 46088452

Intron Length:

3212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGGA

5'SS Class:

major

3'SS Sequence:

TGCTCCTTACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGCTCCTTACTA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

65.9

39.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

69.3

0.43

0.9

62.9

38.3

Minor 5ss

28.7

-2.4

3.5

38.6

46.4

Minor BPS

65.8

0.49

1.6

71.68

Associated Gene:

Gene:

PTPN21

Ensembl Gene ID:

ENSAPLG00000008585

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046700

46053290 - 46088500

35211