Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_46096814_46099861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46096814 - 46099861

Intron Length:

3048

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCTAT

U12 Branch Point Sequence:

TGCTGTCTATTT

Flanking Amino Acid:

LGNNTVRFTVWLHGVLDKLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

73.2

38.4

Major BPS

58.6

0.22

1.4

58.5

47.9

Major PPT

80.4

0.68

0.9

77.6

35.4

Minor 5ss

50.3

0.01

2.4

63.2

42.8

Minor BPS

42.6

-0.4

2.2

60.56

43.8

Associated Gene:

Gene:

ZC3H14

Ensembl Gene ID:

ENSAPLG00000008694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031291

46093174 - 46116346

23173

ENSAPLT00000009101

46093174 - 46115363

22190