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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46111858_46112624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46111858 - 46112624

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGAAT

U12 Branch Point Sequence:

GATGTCTGAATT

Flanking Amino Acid:

CVYHHPTLPCKVFPNCKFAD

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

35.1

Major BPS

0.3

1.4

71.9

Major PPT

0.81

0.6

84.9

22.7

Minor 5ss

32.3

-2

2.7

37.1

33.8

Minor BPS

56.9

0.29

1.5

70.42

40.6

Associated Gene:

Gene:

ZC3H14

Ensembl Gene ID:

ENSAPLG00000008694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031291

46093174 - 46116346

23173

ENSAPLT00000009101

46093174 - 46115363

22190