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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46112762_46113812_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46112762 - 46113812

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTGTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTATTCTGATTC

Flanking Amino Acid:

RRNPLPPPKPVPLPTQSPSS

Intron Amino Acid Position:

610

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

33.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.5

0.66

0.9

81.2

30.9

Minor 5ss

25.8

-2.8

2.9

29.5

43.2

Minor BPS

0.14

1.7

67.68

Associated Gene:

Gene:

ZC3H14

Ensembl Gene ID:

ENSAPLG00000008694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031291

46093174 - 46116346

23173

ENSAPLT00000009101

46093174 - 46115363

22190