Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_46125133_46125589_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46125133 - 46125589

Intron Length:

457

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGAACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

LFDFPCPEKFAKHKRFLGHS

Intron Amino Acid Position:

1930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

72.9

35.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

38.7

-1.3

3.1

57.1

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

EML5

Ensembl Gene ID:

ENSAPLG00000008892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030059

46124682 - 46228808

104127

ENSAPLT00000022285

46124682 - 46228808

104127

ENSAPLT00000009286

46124682 - 46228808

104127