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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46125744_46128164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46125744 - 46128164

Intron Length:

2421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATTTTCAAAATA

Flanking Amino Acid:

IDRITWATWTSVLGDEVIGI

Intron Amino Acid Position:

1878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.9

81.8

38.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

86.1

0.81

0.8

84.1

30.8

Minor 5ss

41.1

-1

2.9

57.9

46.4

Minor BPS

0.09

1.9

70.04

36.5

Associated Gene:

Gene:

EML5

Ensembl Gene ID:

ENSAPLG00000008892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030059

46124682 - 46228808

104127

ENSAPLT00000022285

46124682 - 46228808

104127

ENSAPLT00000009286

46124682 - 46228808

104127