Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_46134161_46135651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46134161 - 46135651

Intron Length:

1491

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAGAA

U12 Branch Point Sequence:

CTTTTTTTACCA

Flanking Amino Acid:

HTITIWKWQEGAKIASRAGH

Intron Amino Acid Position:

1508

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

58.2

0.21

1.1

55.4

40.4

Major PPT

86.4

0.82

0.8

81.4

34.9

Minor 5ss

31.4

-2.1

3.1

46.4

Minor BPS

64.6

0.45

1.6

73.92

38.7

Associated Gene:

Gene:

EML5

Ensembl Gene ID:

ENSAPLG00000008892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009286

46124682 - 46228808

104127

ENSAPLT00000030059

46124682 - 46228808

104127

ENSAPLT00000022285

46124682 - 46228808

104127