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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4613488_4617371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4613488 - 4617371

Intron Length:

3884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

TTCTTTCTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TCTTTCTGAAAG

Flanking Amino Acid:

GGDGFIAAMQEPGMAVHNAS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

0.5

1.1

76.9

32.8

Major PPT

70.8

0.47

1.1

74.5

34.2

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

59.9

0.17

1.6

65.14

42.5

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869