Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_46138717_46140814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46138717 - 46140814

Intron Length:

2098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

TTTTCCATTACA

Flanking Amino Acid:

FTNIVATGQVGDSADMSATA

Intron Amino Acid Position:

1443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

87.2

0.84

0.7

81.4

29.1

Minor 5ss

49.9

-0

2.4

66.4

45.1

Minor BPS

68.5

0.58

1.9

84.96

34.1

Associated Gene:

Gene:

EML5

Ensembl Gene ID:

ENSAPLG00000008892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022285

46124682 - 46228808

104127

ENSAPLT00000009286

46124682 - 46228808

104127