Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_46159344_46161115_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46159344 - 46161115

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCACCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

CATACCTGAATG

Flanking Amino Acid:

CMLAVRKLKKGGRCCCFSPD

Intron Amino Acid Position:

1042

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.9

Major BPS

82.3

0.8

83.6

25.8

Major PPT

69.4

0.44

0.9

62.4

38.6

Minor 5ss

37.8

-1.4

42.6

44.5

Minor BPS

56.5

0.07

1.6

58.42

43.1

Associated Gene:

Gene:

EML5

Ensembl Gene ID:

ENSAPLG00000008892

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030059

46124682 - 46228808

104127

ENSAPLT00000022285

46124682 - 46228808

104127

ENSAPLT00000009286

46124682 - 46228808

104127