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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4617463_4627893_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4617463 - 4627893

Intron Length:

10431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCCACTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTATTTTTAATG

Flanking Amino Acid:

RFHSMKCGPSGSFTCFNGGE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

26.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.6

0.51

0.9

70.1

35.5

Minor 5ss

39.7

-1.2

2.8

45.9

43.7

Minor BPS

72.1

0.56

1.2

71.31

36.2

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869