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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46241392_46248436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

46241392 - 46248436

Intron Length:

7045

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CATTCTTCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

93.5

0.98

0.6

92.1

18.4

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

65.2

0.55

1.5

77.09

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009383

46241278 - 46271939

30662