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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46258980_46259134_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

46258980 - 46259134

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTACCATCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTGAT

U12 Branch Point Sequence:

ATGTGCTTACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.6

32.3

Major BPS

0.62

65.3

41.5

Major PPT

77.7

0.62

0.9

74.4

35.1

Minor 5ss

33.3

-1.9

3.5

48.8

47.4

Minor BPS

55.5

0.17

2.1

69.31

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009383

46241278 - 46271939

30662