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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46259295_46260175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46259295 - 46260175

Intron Length:

881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAAAAA

U12 Branch Point Sequence:

TCCCACTTAAAA

Flanking Amino Acid:

ASGRSVRIGTASMITNPDGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

73.5

38.6

Major BPS

61.4

0.28

1.1

67.9

34.4

Major PPT

84.3

0.77

0.7

81.6

23.4

Minor 5ss

-1

2.8

53.5

43.7

Minor BPS

55.4

0.17

1.7

63.19

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047709

46259208 - 46272333

13126

ENSAPLT00000009383

46241278 - 46271939

30662