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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46270318_46271815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46270318 - 46271815

Intron Length:

1498

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

CCTTCTACATCT

Flanking Amino Acid:

WKVQIGKCCYRLGLYREAEK

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

70.2

0.5

1.1

77.2

Major PPT

0.61

0.8

74.4

36.5

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

45.4

-0.2

64.57

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047709

46259208 - 46272333

13126

ENSAPLT00000009383

46241278 - 46271939

30662