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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46271904_46272324_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46271904 - 46272324

Intron Length:

421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

AGAAAGGAGTCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

AAAATCAAAACA

Flanking Amino Acid:

MVDTILYLAKRP*

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

62.4

0.31

32.1

Major PPT

45.2

-0.2

1.2

32.6

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

44.8

-0.4

1.9

53.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008999

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047709

46259208 - 46272333

13126