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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46416087_46426813_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46416087 - 46426813

Intron Length:

10727

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

TTTTTTTTTTCT

Flanking Amino Acid:

LNTPPEIQAGFPPGVIQNGA

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

68.8

37.4

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

88.6

0.87

0.6

20.1

Minor 5ss

32.2

-2

2.7

39.2

40.4

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

FOXN3

Ensembl Gene ID:

ENSAPLG00000009060

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037952

46404419 - 46502132

97714

ENSAPLT00000031324

46404419 - 46441719

37301

ENSAPLT00000023394

46404470 - 46505020

100551

ENSAPLT00000009427

46404470 - 46502932

98463