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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4644374_4645818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4644374 - 4645818

Intron Length:

1445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCAGT

5'SS Class:

major

3'SS Sequence:

GTTATTTGTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

AAGTGTTTAATC

Flanking Amino Acid:

MDPCDIHLQAASYAAEACSI

Intron Amino Acid Position:

682

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

68.8

43.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

73.8

0.54

69.6

41.4

Minor 5ss

34.3

-1.8

3.2

48.3

47.5

Minor BPS

55.4

0.15

1.7

61.32

38.7

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869