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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4651225_4661751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4651225 - 4661751

Intron Length:

10527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTATTATTACTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTTGTTATTA

Flanking Amino Acid:

PCVSGCVCPPGLVKHGDVCL

Intron Amino Acid Position:

899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

86.9

30.1

Major BPS

84.7

0.86

74.3

40.7

Major PPT

73.4

0.53

42.3

Minor 5ss

35.8

-1.6

2.9

43.1

43.9

Minor BPS

0.12

2.2

74.26

38.3

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869