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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46601333_46604112_R

Intron Information:

Intron Rank:

139626

Intron Class:

major

Intron Phase:

Intron Coordinates:

46601333 - 46604112

Intron Length:

2780

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAC

U12 Branch Point Sequence:

GGAGGTTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

72.4

0.56

79.3

29.5

Major PPT

86.5

0.82

0.8

84.4

30.5

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.1

-0.3

1.9

49.81

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017804

46601102 - 46617884

16783

ENSAPLT00000043410

46600468 - 46617884

17417

ENSAPLT00000034132

46600468 - 46617884

17417

ENSAPLT00000025422

46600468 - 46617884

17417