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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46602826_46604112_R

Intron Information:

Intron Rank:

139639

Intron Class:

major

Intron Phase:

Intron Coordinates:

46602826 - 46604112

Intron Length:

1287

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CATATCGTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

ATATCGTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

79.7

0.74

79.6

35.6

Major PPT

72.7

0.51

64.7

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.6

-0.4

2.4

55.91

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025927

46602745 - 46617884

15140