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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46604202_46606816_R

Intron Information:

Intron Rank:

139630

Intron Class:

major

Intron Phase:

Intron Coordinates:

46604202 - 46606816

Intron Length:

2615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTATTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTCTTTTTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

74.4

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

88.9

0.88

0.7

88.7

27.1

Minor 5ss

41.2

-1

2.5

51.1

45.4

Minor BPS

61.5

0.44

1.6

80.48

35.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034132

46600468 - 46617884

17417

ENSAPLT00000025927

46602745 - 46617884

15140

ENSAPLT00000025422

46600468 - 46617884

17417

ENSAPLT00000024816

46593902 - 46617884

23983

ENSAPLT00000043410

46600468 - 46617884

17417