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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4661860_4667044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4661860 - 4667044

Intron Length:

5185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATACATTTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAC

U12 Branch Point Sequence:

TTGGTCATACAT

Flanking Amino Acid:

GDKVISSCHTCICQHGSFQC

Intron Amino Acid Position:

935

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

0.4

1.1

57.8

38.6

Major PPT

76.4

0.59

0.9

69.8

40.4

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

-0.3

65.27

45.2

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869