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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46694902_46696280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46694902 - 46696280

Intron Length:

1379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTTAATTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTAATCTTAATT

Flanking Amino Acid:

WQIFTAFDVQSRGFLTFEDF

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

85.1

25.6

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

62.9

0.29

1.1

40.4

Minor 5ss

46.5

-0.4

2.7

61.9

36.7

Minor BPS

68.6

0.66

1.3

76.97

39.8

Associated Gene:

Gene:

EFCAB11

Ensembl Gene ID:

ENSAPLG00000009076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009435

46643786 - 46706892

63107

ENSAPLT00000047845

46643786 - 46703596

59811

ENSAPLT00000038451

46643786 - 46703505

59720