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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4669561_4670377_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4669561 - 4670377

Intron Length:

817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTTGGA

5'SS Class:

major

3'SS Sequence:

CTTTCTTGTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

CTCCCCTTCATT

Flanking Amino Acid:

EFGNSWTAVECVDSSDIRNP

Intron Amino Acid Position:

1116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.1

65.4

40.7

Major BPS

0.62

1.1

77.2

Major PPT

73.4

0.53

1.1

78.8

33.5

Minor 5ss

31.1

-2.2

3.3

41.5

44.9

Minor BPS

58.3

0.34

1.8

72.74

44.7

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869