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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4670495_4671950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4670495 - 4671950

Intron Length:

1456

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTATATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATAGTTTTAATT

Flanking Amino Acid:

SEAFEACHPVIDVTWFYSNC

Intron Amino Acid Position:

1155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.5

40.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

86.1

0.81

0.8

77.9

40.4

Minor 5ss

34.3

-1.8

2.8

37.3

42.5

Minor BPS

0.52

1.3

74.15

37.4

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869