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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46707710_46708930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46707710 - 46708930

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTCATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CAATTTTTAATG

Flanking Amino Acid:

RPFDNISFCQAKLDIAFGTH

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.1

0.79

0.7

81.1

30.5

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

60.1

0.18

1.3

56.34

39.8

Associated Gene:

Gene:

TDP1

Ensembl Gene ID:

ENSAPLG00000015575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016275

46703660 - 46727242

23583