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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46708966_46710039_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46708966 - 46710039

Intron Length:

1074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCTATTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TATATTCTATTT

Flanking Amino Acid:

KLDIAFGTHHTKMMLLLYEE

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

71.4

0.53

67.3

39.3

Major PPT

78.2

0.63

82.8

32.3

Minor 5ss

37.5

-1.4

2.7

45.1

35.9

Minor BPS

46.3

-0.2

1.8

65.9

39.1

Associated Gene:

Gene:

TDP1

Ensembl Gene ID:

ENSAPLG00000015575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016275

46703660 - 46727242

23583