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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46715321_46716937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46715321 - 46716937

Intron Length:

1617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTAAAA

5'SS Class:

major

3'SS Sequence:

TCTTTCTCACCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ACTGTTTTAATC

Flanking Amino Acid:

EKWGHLRLRKLLKEHASSVP

Intron Amino Acid Position:

369

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

35.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.5

0.69

0.8

74.6

Minor 5ss

31.8

-2.1

3.1

40.4

45.3

Minor BPS

60.4

0.31

1.3

63.17

37.5

Associated Gene:

Gene:

TDP1

Ensembl Gene ID:

ENSAPLG00000015575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016275

46703660 - 46727242

23583