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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46717382_46724763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46717382 - 46724763

Intron Length:

7382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTACATTTA

5'SS Class:

major

3'SS Sequence:

TCTGTTTCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

AATATCTGAAAA

Flanking Amino Acid:

GYPGKQISKRNKWSAEVSGR

Intron Amino Acid Position:

454

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

71.3

35.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

80.7

0.69

0.8

73.6

Minor 5ss

43.8

-0.7

3.1

57.1

45.6

Minor BPS

52.2

0.06

1.5

62.26

36.7

Associated Gene:

Gene:

TDP1

Ensembl Gene ID:

ENSAPLG00000015575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016275

46703660 - 46727242

23583