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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46726767_46727182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46726767 - 46727182

Intron Length:

416

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTCTGCTCTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCATACTT

Flanking Amino Acid:

LGVLFLPSAFEKILRCVVLN

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

72.4

32.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

60.8

0.24

1.7

73.1

37.3

Minor 5ss

43.1

-0.8

2.8

56.6

41.9

Minor BPS

48.4

-0

1.9

69.5

41.9

Associated Gene:

Gene:

TDP1

Ensembl Gene ID:

ENSAPLG00000015575

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016275

46703660 - 46727242

23583