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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46866511_46866763_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46866511 - 46866763

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGGG

5'SS Class:

major

3'SS Sequence:

TTATTTTATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCC

Flanking Amino Acid:

MGQSQSGGHGP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

56.6

42.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.8

0.71

0.8

82.2

34.4

Minor 5ss

23.3

-3.1

3.2

25.4

39.4

Minor BPS

71.4

0.65

1.5

81.41

33.2

Associated Gene:

Gene:

PSMC1

Ensembl Gene ID:

ENSAPLG00000015830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037579

46865761 - 46874296

8536

ENSAPLT00000016507

46866508 - 46874111

7604