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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46866818_46867587_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46866818 - 46867587

Intron Length:

770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATGGATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTTTTCACC

Flanking Amino Acid:

GPGGGKKDDKDKKKKYEPPV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

55.5

0.12

1.2

60.9

43.6

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

69.1

0.58

1.7

81.25

33.5

Associated Gene:

Gene:

PSMC1

Ensembl Gene ID:

ENSAPLG00000015830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037579

46865761 - 46874296

8536

ENSAPLT00000016507

46866508 - 46874111

7604