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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46870276_46871605_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46870276 - 46871605

Intron Length:

1330

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTCTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GTTGTCTTAAAG

Flanking Amino Acid:

IDEIDAIGTKRYDSNSALIR

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

70.6

42.2

Major BPS

0.62

1.4

85.7

34.9

Major PPT

71.7

0.49

1.1

71.2

38.9

Minor 5ss

37.4

-1.4

3.5

48.2

Minor BPS

61.5

0.22

1.6

64.96

42.7

Associated Gene:

Gene:

PSMC1

Ensembl Gene ID:

ENSAPLG00000015830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037579

46865761 - 46874296

8536

ENSAPLT00000016507

46866508 - 46874111

7604