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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46879807_46881988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46879807 - 46881988

Intron Length:

2182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TTTTTCTTTTTT

Flanking Amino Acid:

MRKKLTEHVQRADVGEIYYT

Intron Amino Acid Position:

1059

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

32.1

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

82.1

0.72

0.8

79.8

32.2

Minor 5ss

40.6

-1

3.1

57.9

46.2

Minor BPS

-0.2

3.6

83.03

38.5

Associated Gene:

Gene:

NRDE2

Ensembl Gene ID:

ENSAPLG00000015870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016561

46876972 - 46904343

27372

ENSAPLT00000034833

46876972 - 46904343

27372

ENSAPLT00000027263

46876972 - 46904343

27372