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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46884386_46885015_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46884386 - 46885015

Intron Length:

630

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCACTCTA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTAAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTGTTTTAAAG

Flanking Amino Acid:

EEDCEDPERQVLFDDLGPSM

Intron Amino Acid Position:

621

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.4

68.9

43.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.7

82.2

33.3

Minor 5ss

38.8

-1.3

2.9

50.8

45.4

Minor BPS

62.1

0.24

1.6

67.62

40.4

Associated Gene:

Gene:

NRDE2

Ensembl Gene ID:

ENSAPLG00000015870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034833

46876972 - 46904343

27372

ENSAPLT00000027263

46876972 - 46904343

27372

ENSAPLT00000016561

46876972 - 46904343

27372