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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46886262_46887973_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

46886262 - 46887973

Intron Length:

1712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCAATT

5'SS Class:

major

3'SS Sequence:

CTGAAAAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CCCCGCTGAAAA

Flanking Amino Acid:

SVKDLPTKGQVEFFEPFWDS

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.2

75.5

40.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

49.5

-0

1.1

41.4

40.9

Minor 5ss

43.6

-0.7

3.3

66.2

44.9

Minor BPS

42.8

-0.5

1.9

46.51

42.9

Associated Gene:

Gene:

NRDE2

Ensembl Gene ID:

ENSAPLG00000015870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034833

46876972 - 46904343

27372

ENSAPLT00000027263

46876972 - 46904343

27372

ENSAPLT00000016561

46876972 - 46904343

27372