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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46891800_46891988_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46891800 - 46891988

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTGTTTAAAG

Flanking Amino Acid:

NAWMEFVSFQDELMRGPSPY

Intron Amino Acid Position:

342

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

74.5

0.55

1.1

74.5

39.3

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

62.6

0.26

1.9

72.3

40.7

Associated Gene:

Gene:

NRDE2

Ensembl Gene ID:

ENSAPLG00000015870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034833

46876972 - 46904343

27372

ENSAPLT00000027263

46876972 - 46904343

27372

ENSAPLT00000016561

46876972 - 46904343

27372