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Intron Name: Anas_platyrhynchos_platyrhynchos_5_46939663_46941980_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

46939663 - 46941980

Intron Length:

2318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCCATTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GGAAGTTTAATT

Flanking Amino Acid:

QDMINEVDADGNGTIDFPEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

27.7

Major BPS

81.8

0.79

1.1

34.5

Major PPT

69.2

0.43

1.1

73.1

36.7

Minor 5ss

38.8

-1.3

3.4

43.6

Minor BPS

49.4

0.03

1.8

63.02

41.2

Associated Gene:

Gene:

CALM1

Ensembl Gene ID:

ENSAPLG00000016568

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036552

46938142 - 46944142

6001