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Intron Name: Anas_platyrhynchos_platyrhynchos_5_4694438_4695027_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4694438 - 4695027

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

AAATGTGCCTTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TGTCTTTTAAAT

Flanking Amino Acid:

RETATLQTCTPITENECIKY

Intron Amino Acid Position:

2710

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

77.2

32.9

Major BPS

90.4

0.7

90.2

19.3

Major PPT

55.9

0.13

51.7

42.8

Minor 5ss

34.1

-1.8

2.9

47.9

41.8

Minor BPS

66.1

0.58

1.3

79.19

36.4

Associated Gene:

Gene:

OTOG

Ensembl Gene ID:

ENSAPLG00000008072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008416

4613122 - 4697990

84869