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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47061559_47088042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47061559 - 47088042

Intron Length:

26484

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

CAAATCTCAACC

Flanking Amino Acid:

PTHVKSMQRLALILHQLGRY

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

0.01

1.6

57.36

40.8

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979