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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47087416_47088042_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47087416 - 47088042

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATTC

Flanking Amino Acid:

PTHVKSMQRLDRAK*

Intron Amino Acid Position:

746

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

88.7

0.87

0.6

88.9

20.4

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

52.9

0.07

1.8

65.67

40.8

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016803

47087401 - 47175116

87716