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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47127326_47128127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47127326 - 47128127

Intron Length:

802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTAATCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

LALQLAISRQIPEALGYVRQ

Intron Amino Acid Position:

1080

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

1.1

82.6

30.6

Major BPS

87.3

0.93

0.8

36.5

Major PPT

84.6

0.78

0.9

86.5

31.5

Minor 5ss

39.2

-1.2

2.7

51.6

44.8

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979