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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47128201_47131535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47128201 - 47131535

Intron Length:

3335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

GTTTCTTTGTTT

Flanking Amino Acid:

LQRKALLAFQRAHSLSPTDH

Intron Amino Acid Position:

1055

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.6

0.87

0.7

81.3

36.4

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

47.1

-0.1

3.4

79.17

37.6

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979

ENSAPLT00000020130

47087944 - 47179505

91562