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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47131909_47133203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

47131909 - 47133203

Intron Length:

1295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

ATAATGTTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TGTTTTATAATG

Flanking Amino Acid:

AKLCMGSLHWLEEAERFAKT

Intron Amino Acid Position:

997

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

74.2

0.55

44.9

Minor 5ss

43.4

-0.7

3.2

57.4

46.8

Minor BPS

57.3

0.09

1.6

64.31

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979

ENSAPLT00000027405

47061337 - 47236315

174979