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Intron Name: Anas_platyrhynchos_platyrhynchos_5_47134626_47138420_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

47134626 - 47138420

Intron Length:

3795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTTGTCCA

5'SS Class:

major

3'SS Sequence:

CCCGAAAAAATAG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

GTTCCTTTAATG

Flanking Amino Acid:

RRGQYEMLSECLERAMKFAF

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.2

65.4

40.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

47.6

-0.1

36.9

31.9

Minor 5ss

-1.5

2.6

43.2

43.7

Minor BPS

70.3

0.5

1.3

69.55

Associated Gene:

Gene:

TTC7B

Ensembl Gene ID:

ENSAPLG00000016070

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027405

47061337 - 47236315

174979

ENSAPLT00000020130

47087944 - 47179505

91562

ENSAPLT00000016803

47087401 - 47175116

87716

ENSAPLT00000042972

47061337 - 47236315

174979

ENSAPLT00000002719

47061337 - 47236315

174979

ENSAPLT00000038034

47061337 - 47236315

174979